1,682 research outputs found

    Orbiting binary black hole evolutions with a multipatch high order finite-difference approach

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    We present numerical simulations of orbiting black holes for around twelve cycles, using a high-order multipatch approach. Unlike some other approaches, the computational speed scales almost perfectly for thousands of processors. Multipatch methods are an alternative to AMR (adaptive mesh refinement), with benefits of simplicity and better scaling for improving the resolution in the wave zone. The results presented here pave the way for multipatch evolutions of black hole-neutron star and neutron star-neutron star binaries, where high resolution grids are needed to resolve details of the matter flow

    Appraisal of the inherent socio-demographic dynamics of HIV/AIDS epidemic in four districts of South-Western Uganda

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    Although HIV prevalence in Uganda is much lower than it once was, AIDS is still claiming many lives each year with clear signs of escalating rural epidemics. The objective of this study was to appraise the socio-economic and demographic dynamics of HIV/AIDS epidemic in South-Western Uganda. Data were collected with standard closed ended semi-structured questionnaires self-administered to consenting, 605 HIV/AIDS patients, selected using the multistage random sampling technique, logistic linear regression, randomized block design and Pearson’s Chi square test (á=0.01) were used to analyse the data obtained. The duration of carriage was inversely proportional (r=-0.94) to population of HIV/AIDS patients surveyed. There were 98.2% Bantu (55.5% Banyankole and 22.6% Baganda); 77.5% females and 22.5% males; more widows (38.0%) than married (35.5%). HIV/AIDS prevalence generally decreased with increasinglevel of education. The highest (66.7%) HIV/AIDS prevalence was recorded in Bushenyi, followed by 58.4% in Masaka, 57.9% in Mbarara and 53.3% in Rukungiri. Rukungiri patients above 60 years of age harboured 57.1% HIV/AIDS followed by 45.5% among Masaka patients aged 11 - 20 years and 40% among Mbarara patients less than 10 years of age. HIV/AIDS prevalence was significantly (p<0.05) dependent on socio-economic and demographic factors of surveyed population. Therefore socio-economic and demographic factors underlie HIV/AIDS prevalence in this region. Observed differences in prevalence of HIV/AIDS between the surveyed districts wereremarkable and warrant regular surveillance for updated disease  epidemiology. Education can debunk the generally misconstrued rolesof social, economic and demographic factors in the spread of HIV/AIDS

    “Western Mediterranean” (WM) broad band network: permanent seismic monitoring at the Ibero-Maghrebian region

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    The “Ibero-Maghrebian” region, a western part of the Eurasia-Africa plate boundary, is a broad deformation area without a well defined plate boundary line, comprising the Southern part of the Iberian Peninsula, the Northwestern part of Africa, the Gulf of Cadiz and the Alboran Sea, with a convergence between Iberia and Africa at some mm/year (Nuvel-1A model, DeMets et al, 1994) in a NNW-SSE direction, and a dif- ferential motion at Alboran Sea area (Buforn et al, 1995). Although seismic activity is characterized by a low to moderate magnitude and shallow depth earthquakes, big events are also well documented, among others: Lisbon earthquake (1755, I0= X), Gulf of Cadiz (1969, Ms= 8.1), or, more recently Bourmedes (2003, Mw= 7.1), some them with an associated tsunami, like Lisbon or Bourmedes earthquakes. An interme- diate seismic activity is also clearly registered from Gulf of Cadiz to mid Alboran Sea (Martin Davila and Pazos, 2003), and very deep earthquakes (h> 650 km) have been registered at Granada basin (1954, M= 7.0). In order to better study the seismic characteristics of this area, from 1996 on, ROA and the University Complutense of Madrid (UCM), with the collaboration of Geo- forschungZentrum of Potsdam (GFZ), have deployed a broad band seismic net with stations located at Southern Spain and Spanish possessions located Northern Africa, mainly surrounding the Alboran Sea, complementing the previously installed ROA SP and LP stations. This net has been named as “Western Mediterranean net” (WM FDSN code). As net was evolving, new Institutes and stations joined WM net, such a way at present is formed by ten stations located at: San Fernando (SFS), Málaga (MALA), Cartagena (CART), and Evora (UEVO, University of Evora, Portugal) at Iberian peninsula, Mahón (MAHO) at Minorca island, three stations at Melilla (MELI), Peñón de Vélez-Gomera (PVLZ), and Ceuta (CEU) at Spanish villages located Northern Africa in South Alboran Sea area, and Averroes (AVE) and Ifrane (IFR) installed at Morocco mainland as a joined effort among ISRABAT (Institut Scientifique, Univer- sité Mohammed V), ROA and UCM. Most stations are collocated with permanent geodetic GPS stations (Gárate et al, 2004). Next future plans include the installation of five stations by U. Evora at Southern Portugal area, a new station at Morocco by ISRABAT, ROA and UCM and also a new station at Oran (Algeria), as a collaboration among Université d’Oran (Algeria), ROA and UCM. All them will be associated to WM net. All WM network stations include Streckeisen STS-2 sensor, a Quanterra or Earth Data digitizer, and a SeiscomP process system (Heinloo, 2004), and all them are available in real time via phone modem or Internet, except PVLZ and CEU, which will be in short. In this work, partly funded by the Spanish Ministry of Education and Science (MEC) through the project REN2006-10311-C03-01/02 (RISTE), we will present the present status, the next future plans and some related activities of WM net

    Biosorption of heavy metal and dyes : a promising technology leather wastewater treatment

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    The presence of dyes and heavy metals is usual in industrial processes like chrome tanning in tannery industry and their removal may be an environmental problem. Different techniques were developed and applied for the treatment of dyes and heavy metals in effluents. Among them, adsorption showed to be an economic, simple operation and an effective technique. Zeolites have a strong affinity for cations of transition metals, but only little affinity for anions and non-polar organic molecules. The application of a zeolite to heavy metal removal may be improved by the presence of microorganisms. The aim of this work is the treatment of an effluent containing dyes and toxic metals. Several operation parameters such as pH, concentration and kinetic behavior were studied. This innovative process for treating dyes and heavy metal effluents showed that the zeolite-biomass system is able to perform the removal of a combination of Azure B and chromium(VI). A mixture of dye and metal solutions was treated reaching a removal higher than 50% in the case of chromium (VI) and higher than 99% for dye, in 8 days

    Application of zeolite-Arthrobacter viscosus system for the removal of heavy metal and dye : chromium and azure B

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    A hybrid system combining the ion-exchange properties of a NaY zeolite and the characteristics of the bacterium Arthrobacter viscosus was investigated to treat polluted effluents with dye and toxic metals. In this study, the dye and the metal ion employed were a thiazine dye, Azure B, and chromium (VI), respectively. Initially, the removal of dye by the zeolite was tested. The analysis of dye equilibrium isotherms data was done using Langmuir, Freundlich, Sips and Redlich–Peterson models. Redlich–Peterson model gave the better fitting to data. In the dye adsorption studies, pseudo-second order kinetics showed the more reliable results. Operating at the optimised conditions in the treatment of single pollutants, a mixture of dye and metal solutions was treated reaching a removal higher than 50% for chromium (VI) and higher than 99% for dye, in 8 days.This work was supported by Fundacao para a Ciencia e Tecnologia (FCT-Portugal) and Xunta de Galicia under programme 08MDS034 314PR. The authors are grateful to University of Vigo for financial support of the research of Emilio Rosales under a mobility grant

    Efecto de los gradientes de pastoreo ovino sobre la vegetación y el suelo en Península Valdés, Patagonia Argentina

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    La introducción de ganado doméstico provocó modificaciones en la vegetación y en el suelo de la Patagonia extra-andina. Estos cambios alteraron procesos ecosistémicos, aumentaron la desertificación y causaron pérdida de biodiversidad. Es frecuente encontrar gradientes decrecientes de actividad animal partiendo de las aguadas (piósferas), que resultan adecuados para determinar el impacto del pastoreo sobre los ecosistemas. El objetivo de este estudio fue evaluar el efecto de la intensidad de pastoreo ovino a partir de gradientes de piósfera sobre la estructura de la vegetación y el suelo en estepas arbustivas representativas de Península Valdés, Argentina. Mediante modelos lineales generalizados mixtos (GLMM) y técnicas multivariadas se estudiaron las variaciones en la cobertura vegetal, complejidad vertical de la vegetación, número y área de parches vegetados, microtopografía del suelo y su compactación en relación con el gradiente de pastoreo. La intensidad del pastoreo disminuyó con la distancia a la aguada y explicó más de 50% de la variabilidad ambiental. Esto demuestra la existencia de efecto piósfera. La cobertura de herbáceas, mantillo, complejidad vertical de la vegetación y la microtopografía aumentaron al disminuir la presión de pastoreo en los sitios más alejados de la aguada, mientras que el porcentaje de suelo desnudo, gravas, cobertura de anuales y la compactación del suelo presentaron un patrón opuesto. Este estudio evidencia, por primera vez, la existencia de piósferas ovinas en Península Valdés e indica que la intensidad de pastoreo en la región se asocia con alteraciones ambientales compatibles con procesos importantes de degradación ecosistémica. Dada la importancia que reviste la península en el contexto de la conservación biológica de la región, se requieren más estudios de este tipo para una implementación efectiva de medidas de manejo que integren la ganadería y la conservación de los recursos naturales.The introduction of domestic livestock in the arid Patagonia produced changes in vegetation and soil that altered fundamental ecosystem processes, increasing desertification and biodiversity loss. In this region, it is common to observe gradients of decreasing animal activity from watering points where livestock impact is greatest near the watering sites, called piospheres, particularly suitable for assessing the effect of grazing on arid ecosystems. The aim of this study was to evaluate the effect of sheep-grazing intensity using piospheres on the structure of the vegetation and soil in shrubby steppes of Peninsula Valdes, Argentina. Variation of plant cover, vertical complexity of the vegetation, number and area of vegetated patches, micro-topography and soil compaction in relation to piosphere gradients were studied using Generalized Linear Mixed Models (GLMM) and multivariate analyses. Grazing intensity decreased according to increasing distance to the watering point. This fact, explaining more than 50% of the overall environmental variability, confirmed the existence of a piosphere gradient on each studied site. Such environmental changes were characterized by a gradual increase in grass and litter cover, vertical complexity of vegetation and soil microtopography at increasing distances from the watering point. Percentages of bare soil and gravel, cover of annual grasses and soil compaction showed the opposite pattern. This study demonstrates, for the first time, the existence of sheep piospheres in the shrubby steppes of Peninsula Valdes. Our results indicate that sheep-grazing intensity is associated with changes in the structure and composition of the vegetation and the soil characteristics that are compatible with degradation processes in the study region. Taking into account the importance of Peninsula Valdes in the context of biodiversity conservation, more studies of this type are required to implement effective management actions integrating livestock and conservation efforts on the terrestrial ecosystems of the regionFil: Cheli, Germán H. CCT-CONICE-CENPAT. Instituto Patagónico para el Estudio de los Ecosistemas Continentales; Argentina. Universidad Nacional de la Patagonia San Juan Bosco. Facultad de Ciencias Naturales; ArgentinaFil: Pazos, Gustavo E. CCT-CONICE-CENPAT. Instituto Patagónico para el Estudio de los Ecosistemas Continentales; Argentina. Universidad Nacional de la Patagonia San Juan Bosco. Facultad de Ciencias Naturales; ArgentinaFil: Flores, Gustavo E. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Argentino de Investigaciones de las Zonas Áridas. Laboratorio de Entomología; ArgentinaFil: Corley, Juan Carlos. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Bariloche. Grupo de Ecología de Poblaciones de Insectos; Argentin

    Inactivation of the monofunctional peptidoglycan glycosyltransferase SgtB allows Staphylococcus aureus to survive in the absence of lipoteichoic acid

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    The cell wall of Staphylococcus aureus is composed of peptidoglycan and the anionic polymers lipoteichoic acid (LTA) and wall teichoic acid. LTA is required for growth and normal cell morphology in S. aureus. Strains lacking LTA are usually viable only when grown under osmotically stabilizing conditions or after the acquisition of compensatory mutations. LTA-negative suppressor strains with inactivating mutations in gdpP, which resulted in increased intracellular c-di-AMP levels, were described previously. Here, we sought to identify factors other than c-di-AMP that allow S. aureus to survive without LTA. LTA-negative strains able to grow in unsupplemented medium were obtained and found to contain mutations in sgtB, mazE, clpX, or vraT. The growth improvement through mutations in mazE and sgtB was confirmed by complementation analysis. We also showed that an S. aureus sgtB transposon mutant, with the monofunctional peptidoglycan glycosyltransferase SgtB inactivated, displayed a 4-fold increase in the MIC of oxacillin, suggesting that alterations in the peptidoglycan structure could help bacteria compensate for the lack of LTA. Muropeptide analysis of peptidoglycans isolated from a wild-type strain and sgtB mutant strain did not reveal any sizable alterations in the peptidoglycan structure. In contrast, the peptidoglycan isolated from an LTA-negative ltaS mutant strain showed a significant reduction in the fraction of highly cross-linked peptidoglycan, which was partially rescued in the sgtB ltaS double mutant suppressor strain. Taken together, these data point toward an important function of LTA in cell wall integrity through its necessity for proper peptidoglycan assembly

    FOOD HABITS OF THE MAGELLANIC HORNED OWL (BUBO MAGELLANICUS) IN A COASTAL ISLAND OF PATAGONIA, ARGENTINA

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    Abstract ∙ The Magellanic Horned Owl (Bubo magellanicus) is one of the most common nocturnal raptors in Patagonia. The aim of this note was to analyze the food habits of this species in a small island from the Patagonian Atlantic coast. Four nesting areas and eight adults of Bubo magellanicus were found; 217 pellets plus disaggregated material were collected. We identified 2774 individual prey items. Insects were the most consumed prey (63.56%), followed by reptiles (13.73%), arachnids (10.92%), mammals (10.42%), and birds (1.37%). Our study show B. magellanicus feeding mainly on arthropods and introduced species, a fact that was not previously reported for this species in Patagonia. Resumen ∙ Hábitos alimenticios del Tucúquere (Bubo magellanicus) en una isla de Patagonia, Argentina El Tucúquere (Bubo magellanicus) es una de las rapaces nocturnas más comunes de la Patagonia. El objetivo de esta nota fue analizar los hábitos alimenticios de esta especie en una pequeña isla de la costa atlántica de la Patagonia. Se encontraron cuatro áreas de nidificación y ocho adultos de Bubo magellanicus y se recolectaron 217 egagrópilas además de material disgregado. Identificamos 2774 individuos presa. Los insectos fueron la presa más consumida (63,56%), seguidos por los reptiles (13,73%), los arácnidos (10,92%), los mamíferos (10,42%) y las aves (1,37%). La relevancia de este estudio reside en que B. magellanicus se alimenta principalmente de artrópodos y especies introducidas, hecho que no se había reportado previamente para esta especie en la Patagonia.

    A Novel Mathematical Approach for Analysis of Integrated Cell–Patient Data Uncovers a 6-Gene Signature Linked to Endocrine Therapy Resistance

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    A significant number of breast cancers develop resistance to hormone therapy. This progression, while posing a major clinical challenge, is difficult to predict. Despite important contributions made by cell models and clinical studies to tackle this problem, both present limitations when taken individually. Experiments with cell models are highly reproducible but do not reflect the indubitable heterogeneous landscape of breast cancer. On the other hand, clinical studies account for this complexity but introduce uncontrolled noise due to external factors. Here, we propose a new approach for biomarker discovery that is based on a combined analysis of sequencing data from controlled MCF7 cell experiments and heterogeneous clinical samples that include clinical and sequencing information from The Cancer Genome Atlas. Using data from differential gene expression analysis and a Bayesian logistic regression model coupled with an original simulated annealing-type algorithm, we discovered a novel 6-gene signature for stratifying patient response to hormone therapy. The experimental observations and computational analysis built on independent cohorts indicated the superior predictive performance of this gene set over previously known signatures of similar scope. Together, these findings revealed a new gene signature to identify patients with breast cancer with an increased risk of developing resistance to endocrine therapy

    Enhanced selective metal adsorption on optimised agroforestry waste mixtures

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    The aim of this work is to ascertain the potentials of different agroforestry wastes to be used as biosorbents in the removal of a mixture of heavy metals. Fern (FE), rice husk (RI) and oak leaves (OA) presented the best removal percentages for Cu(II) and Ni(II), Mn(II) and Zn(II) and Cr(VI), respectively. The performance of a mixture of these three biosorbents was evaluated, and an improvement of 10% in the overall removal was obtained (19.25 mg/g). The optimum mixture proportions were determined using simplexcentroid mixture design method (FE:OA:RI = 50:13.7:36.3). The adsorption kinetics and isotherms of the optimised mixture were fit by the pseudo-first order kinetic model and Langmuir isotherm. The adsorption mechanism was studied, and the effects of the carboxylic, hydroxyl and phenolic groups on metal–biomass binding were demonstrated. Finally, the recoveries of the metals using biomass were investigated, and cationic metal recoveries of 100% were achieved when acidic solutions were used.This work has been funded by the Spanish Ministry of Economy and Competitiveness, Xunta de Galicia and ERDF Funds (Projects CTM 2011-25389 and GRC 2013/003). The authors are grateful to Xunta de Galicia for financial support of the researcher Emilio Rosales under a postdoctoral Grant and the Spanish Ministry of Economy and Competitiveness for financial support of the researcher Marta Pazos under a Ramon y Cajal Grant
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